Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015788844.1_cds_XP_016485310.1_720
CDS Infomation

[gene=LOC107805659] [db_xref=GeneID:107805659] [protein=cis-abienol synthase, chloroplastic-like isoform X2] [protein_id=XP_016485310.1] [location=join(26507..26588,26709..26773,27813..28101,28721..28901,35769..35989,36900..37020,37101..37198,37807..38018,38489..38598,38712..38810,39980..40124,40343..40588,41545..41853)] [gbkey=CDS]
Sequence

ATGATACTTGGCTACGGAAGCATTATCATACTACCATTTTCTCATCATAAATTGGGAAAT
GGCAAATTATGTTCATCAACTGAAAATACAATTTGCCAGAGACCATGTAGAGGAGTAAGA
TGCAGCTACAGTATTGCTTCATCACTGGATGGTTTCGATGAGGCAAAGGAGAGAATAAAG
AAATCATTTCAGAAAGTAGAGCTATCTCCTTCTTCCTATGACACAGCATGGGTAGCTATG
ATCCCTTCAATAAATTCTGTAAATCAGCCATGTTTTCCACAGTGCTTGGATTGGATTCTT
GAAAATCAAAGAGAAGATGGATCTTGGGGGCTAAATCCTAGCCATTCATTGCTTGTCAAG
GACTCCCTTTCTTCAACTTTAGCATGTTTGCTTGCCCTCCGCAAATGGGGAGTTGGAGAT
AACCAAGTCCAAGGAGGCCTTGTCTTTATTGAAAAGCATGGTTGGGCAGTTGATAACAAG
GATCTGATTTCACCTGTTGGATTTGAGATTATATTTCCCAGTATGATCAAATACGCAGAA
AAAATGAACTTAAATCTGCCTTTGGATCCTGACATTGTCAATCTGGCGATTCGCAACCGA
GATTTAGCAATTGAAAGGGCGTTACAGAATGATTTCAAGGGGAATATTGCAAATTTTGAA
TATATGGCTGAAGGACTTAGTGAATTATGTCAATGGAAGGAAATAATGGTACATCAAAGA
GACAATGGATCATTATTTGATTCACCAGCCACTACTGCAGCTGCCTTGATTTACCATCAA
CACGATGAAAAATGCTTTGAATACTTGAATACAATCTTGAAACTACACAAAAATTGGGTT
CCCACTATCTACCCAACGAAGATACATTCATTGCTTTGCTTGGTTGATACCCTTCAAAGT
CTGGGAGTAGATCGGCATTTTAAAACAGAAATAGAAAATGTTCTAGATGAAATTTACAGG
CTTTGGCAACAAAAGAACGAAGAAATTTTTTCAAACGTTGCCCATTGTGCCTTGGCGTTT
CGGCTTTTACGGATGAGTAACTATGAAGTCTCCCCAGAAGAACTAGTTGAATTTGTTGAT
GAAGTACATTTCTTTTCAACAAGTGGGAAATTTACGAGTCATTTTGAAATTCTTGAGCTC
CACAAAGCTTCACAATTGGCTATTCATGGGAAAGATCACATTTTGGACAAAATTAGTAAT
TGGACAGGATCTTTTATGGAGCAAAAACTCCTAACCTATGACTACATTGATAGGATGTCA
AAAAATGAGGCGGAGTTTGCTTTGAGGAAGTTTTACGCCACATATGGTCGAGTGGAAAAT
CGACGATATAACGAGGCATATGAGGTGAACAATTTTAAAATCTTAAAAGCTGCTTACAGG
TCTCCCACTATTAACAGCATAGATTTACTAAGGTTCTCAAAGCAGGATTTTAATTTGTGC
CAAGCCCAACATCAAGAAGAACTTCAACAACTCAAGAGGTGGGACGGTAATTACTCAACA
GTGCAATTCCATTCAGAGAGGATAAAAATTTTCTTTTCAGCACTTTACAAAACGATAGAG
GAGCTTGCGGCAAAAGCAAATATTAAGCAAGGTCAATGCATCAAAGAACACTTTATAAAC
TTGTGGCTTGATTTGTTAAAGAATATGCTGGTAGAATTTGAGTGGTGGAGAAATCAGACA
ACACCAAGCATAGAAGAGTATTTGTCTGTGGCCTGTGAAACTATTGGTGTTAGATGCATT
ACTCTCATAACACAATGTCTTCTTGGGCCAAAACTATCCAATGATGTTTTACAGAGTTCT
GAAATGAGTGCCTTGTGCAATTGTACCAGTATGGTGGCACGACTCCTTAATGATGTGGGA
TCTTACAAGAGAGAAGAAGCAGAGAGTTCACCAACAAATATAGTCTCGATATTAATAAAT
CAGAGTGAAGGAAAAATCTCTGAAGAAGAAGCTATAAAACATGCAAAGGAAATGCTGGAA
AATAAGAGAAGAGAGTTGCTAGGGATGGTTCTAATTCAAAGAAAAGGAAGCCAATTGCCA
CAAGTGTGCAAGGATATTTTTTGGAAGACATGCAAATCGTCTTATTTCGCATATTCAGAT
GGCGATGAGTTTCGATTTCCAGAGGAAATATTGAAGAATCGTATCAATGAACTACTTTTT
AAACCACTCAAGTCGTAG

Peptide Sequence

PEP ID

XP_016485310.1
PEP Infomation

PREDICTED: cis-abienol synthase, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MILGYGSIIILPFSHHKLGNGKLCSSTENTICQRPCRGVRCSYSIASSLDGFDEAKERIK
KSFQKVELSPSSYDTAWVAMIPSINSVNQPCFPQCLDWILENQREDGSWGLNPSHSLLVK
DSLSSTLACLLALRKWGVGDNQVQGGLVFIEKHGWAVDNKDLISPVGFEIIFPSMIKYAE
KMNLNLPLDPDIVNLAIRNRDLAIERALQNDFKGNIANFEYMAEGLSELCQWKEIMVHQR
DNGSLFDSPATTAAALIYHQHDEKCFEYLNTILKLHKNWVPTIYPTKIHSLLCLVDTLQS
LGVDRHFKTEIENVLDEIYRLWQQKNEEIFSNVAHCALAFRLLRMSNYEVSPEELVEFVD
EVHFFSTSGKFTSHFEILELHKASQLAIHGKDHILDKISNWTGSFMEQKLLTYDYIDRMS
KNEAEFALRKFYATYGRVENRRYNEAYEVNNFKILKAAYRSPTINSIDLLRFSKQDFNLC
QAQHQEELQQLKRWDGNYSTVQFHSERIKIFFSALYKTIEELAAKANIKQGQCIKEHFIN
LWLDLLKNMLVEFEWWRNQTTPSIEEYLSVACETIGVRCITLITQCLLGPKLSNDVLQSS
EMSALCNCTSMVARLLNDVGSYKREEAESSPTNIVSILINQSEGKISEEEAIKHAKEMLE
NKRRELLGMVLIQRKGSQLPQVCKDIFWKTCKSSYFAYSDGDEFRFPEEILKNRINELLF
KPLKS

Transcript Sequence

Gene sequence data has not been registered.